pypairs.datasets.default_cc_marker

pypairs.datasets.default_cc_marker(dataset='leng15')

Cell cycle marker pairs derived from [Leng15] with the default sandbag() settings.

For description of the dataset see leng15().

Parameters:

dataset : Optional[str]

placeholder. only options currently ‘leng15’. Everything else with raise a NotImplementedError

Return type:

Mapping[str, Collection[Tuple[str, str]]]

Returns:

Mapping from category [‘G1’,’G2M’,’S’] to list of gene “marker pairs” [(‘Gene1’, ‘Gene2’), ..].